PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020685544.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 244aa    MW: 27139.9 Da    PI: 9.5261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020685544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.9e-1885134356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr++  +g+WvAeIr p +   r r +lg++++ae Aa a+++a+ kl+ge
  XP_020685544.1  85 YRGVRQRN-WGKWVAEIRLPQN---RMRLWLGTYDSAESAAYAYDRAAYKLRGE 134
                     9****998.**********954...59*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MESPTPFTSP GEINSTLSSI LLSGTNAIDS IFSHLPPPTT LSPTAEPLGS SVYLRQTELL  60
LRFGYQNRVA AAAAEEAAMK KKKMYRGVRQ RNWGKWVAEI RLPQNRMRLW LGTYDSAESA  120
AYAYDRAAYK LRGEYARLNF PELRDAGVDC SDKLRALRLA VDSKIQAVCQ RLSKQRRLKR  180
SGGVGERVEK KGEERKTTSE SPFSVSVNQS LIMAEVGGEM DGGECSLARM PSFDVELIWE  240
VLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.18e-37ERF family protein