PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686102.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 213aa    MW: 22404.3 Da    PI: 9.9854
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000185476123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F+++  L  H++ H
  XP_020686102.1 54 FECQYCFREFTNSQALGGHQNAH 76
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSKIQCQKPS NPTLKLFGFA LEASVDPAPI TDSSFSASTA SVAAAASAAD GRKFECQYCF  60
REFTNSQALG GHQNAHKKER QQLKRAQLHQ AAAASNLYSR ANPMVSAFAT PPPLLPDYLV  120
AGASPPANSF LYFSRPSLPS QFQISHGGVF PSFSNTPPTL GRGIADGVVV GRRIRSVPVS  180
LGQFAAPTIP GGSDNSYGVD LHLSLAPARS SIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.19e-18C2H2 family protein