PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686106.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 231aa    MW: 25578.8 Da    PI: 9.7495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.6e-1067115354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +++  rE+ RRdr+N++f eL ++l +    + +K +Ka iL  A + + +L
  XP_020686106.1  67 KSKACREKMRRDRLNERFLELSSILDPG---KLPKSDKAGILSDAARVLAQL 115
                     56789**********************9...9**************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MTPEVDQTAS YAVPSRASAM FRHRPLDLVS RRCTGMAVVW SRSGLGKGCF SIFIPCRLRD  60
EACCGSKSKA CREKMRRDRL NERFLELSSI LDPGKLPKSD KAGILSDAAR VLAQLKSEAE  120
QLKEANKKLQ ETIKQLKVEK NELRDDKLGL KLEKEKLELQ VKTTGTPTAG LMPPTIAVHP  180
ASGPAIYKAH GEAPAKEVAP LNAFPCLAMW QWLPPAFLDT THDPKLWPPH A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-44bHLH family protein