PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020686130.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 211aa MW: 22320.3 Da PI: 8.469

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020686130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.7	7.3e-33	66	129	7	70
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssa 70 +++++hTkv+gR+RRvRl+ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+ + XP_020686130.1 66 SSKDRHTKVNGRGRRVRLPPICAARIFQLTRELGHKSDGQTIEWLLRQAEPSILAATGSgftQ---T 129 689********************************************************6642...3 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MPGPTSLSLM PSPSSPPLPS RPVSDLLIYN PTPVPSSGAI NAVPLQMQPD TADPKGAGGK 60 KRDGGSSKDR HTKVNGRGRR VRLPPICAAR IFQLTRELGH KSDGQTIEWL LRQAEPSILA 120 ATGSGFTQTP SAAPSPASPP PPPPQPTGFF QFSGIMDYGA AFKGFGFPAV SDGGEDLGVG 180 FRHMPYYTAM LMRPVTADDD DSRAVLLQQE D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-29	TCP family protein