PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020686609.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 649aa MW: 71464.3 Da PI: 7.2998

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020686609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.2	3.3e-09	363	400	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_020686609.1 363 FEHflHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVR 400 664459******************************88 PP
2	BELL	119.6	1.4e-38	225	296	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kkakL+ +l eV++rY+qy++q+q+v+ssFeavag+gsa+ Yt+lAl++iS++FrcL+dai++q+ XP_020686609.1 225 ERQELQMKKAKLVGMLGEVEQRYRQYHHQMQIVVSSFEAVAGHGSARTYTALALQTISKQFRCLRDAISGQL 296 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MATYFHGAPE IHPDGLQTLY LMNPGYVGYA DPAGAPAANM VFLNSGGITS LNPINLSHSP 60 PPNHQQQHFV GIPLPQPQEN SAGRFHYNLW SQAPATNLMG RGTTQQGLSL SLSPQQPHPY 120 GSYRAEAEVS APMPEMTIAG DDGVRPMGTT GPPGTAGIQS VLMNSKYLKA AQELLDEVVS 180 VGKGVGAETM KKNGEKSPMK SSKELDVKGE GESSGKREAE LTTAERQELQ MKKAKLVGML 240 GEVEQRYRQY HHQMQIVVSS FEAVAGHGSA RTYTALALQT ISKQFRCLRD AISGQLKATG 300 RSLGEEDCLV GGAKSIGSRL RLVDHHLRQQ RALQQLGMMQ HNAWRPQRGL PERAVSILRA 360 WLFEHFLHPY PKDSDKLMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY VEETKEHEQM 420 KPEEKSSYSE SNEDSTSKAS SQTKTEQANS FTSKKQDKSN EPKPSSSIAI PVTKFGISNN 480 HDEESLMQPF LKKVRNNESL HLNPLPHSLT LEMKPEEFSN RELLMKFMEA RSNANNGHAL 540 MNGGGNHGGG FNAYSIGDIG RFDTEQFTPS FHGNGVSLTL GLQHCESLSL TGTEPPYLSN 600 ESIPMGNEAN AFCSLNNNPQ ASHPSNAYES IDIQNRKRFA AQLLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MATYFHGAPE IHPDGLQTLY LMNPGYVGYA DPAGAPAANM VFLNSGGITS LNPINLSHSP  60
PPNHQQQHFV GIPLPQPQEN SAGRFHYNLW SQAPATNLMG RGTTQQGLSL SLSPQQPHPY  120
GSYRAEAEVS APMPEMTIAG DDGVRPMGTT GPPGTAGIQS VLMNSKYLKA AQELLDEVVS  180
VGKGVGAETM KKNGEKSPMK SSKELDVKGE GESSGKREAE LTTAERQELQ MKKAKLVGML  240
GEVEQRYRQY HHQMQIVVSS FEAVAGHGSA RTYTALALQT ISKQFRCLRD AISGQLKATG  300
RSLGEEDCLV GGAKSIGSRL RLVDHHLRQQ RALQQLGMMQ HNAWRPQRGL PERAVSILRA  360
WLFEHFLHPY PKDSDKLMLA KQTGLTRSQV SNWFINARVR LWKPMVEEMY VEETKEHEQM  420
KPEEKSSYSE SNEDSTSKAS SQTKTEQANS FTSKKQDKSN EPKPSSSIAI PVTKFGISNN  480
HDEESLMQPF LKKVRNNESL HLNPLPHSLT LEMKPEEFSN RELLMKFMEA RSNANNGHAL  540
MNGGGNHGGG FNAYSIGDIG RFDTEQFTPS FHGNGVSLTL GLQHCESLSL TGTEPPYLSN  600
ESIPMGNEAN AFCSLNNNPQ ASHPSNAYES IDIQNRKRFA AQLLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-112	TALE family protein