PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686677.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 232aa    MW: 26086.5 Da    PI: 7.3722
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.96e-18158192135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  XP_020686677.1 158 CTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRL 192
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDSFSNASVS ACLQKSYHSE ISPNEPVMEQ EENDDVSLEW LSIFMEDCLS GNTTFSIPQN  60
QTPSTNPPPP PTLKLKSSSS SSNDMKFSTK TKTKRRKLTL FEEENTPLLP QAYWLAESEL  120
LLPKKDFDEN PKAKTIEEEV GAQEQVGKDQ GQVQPRKCTH CLSQKTPQWR AGPLGPKTLC  180
NACGVRFKSG RLLPEYRPAK SPTFVSYKHS NSHKKVMEMR MAIPSNQFGL ED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.16e-37GATA family protein