PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686734.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 140aa    MW: 15851.8 Da    PI: 4.329
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB67.52.6e-213751587
           NF-YB 15 rimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87
                    +i+k++lP + ++++d+++++ ec +efi +v+sea+d c+re+++ti+++ +l al  lGf +y+e++ +  
  XP_020686734.1  3 KIIKEMLPPDVRVARDTQDLLVECCVEFINLVSSEANDVCNREDKRTIAPEHVLKALEVLGFGEYIEEVAAAY 75
                    89*****************************************************************997654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MFKIIKEMLP PDVRVARDTQ DLLVECCVEF INLVSSEAND VCNREDKRTI APEHVLKALE  60
VLGFGEYIEE VAAAYEQHKL ETLDSPKGVR FSGIEMTEEE AAAEQQRMFA EARARMNNGV  120
APQKEPEPDR SFDSQNVDHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.45e-55NF-YB family protein