PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020686768.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 241aa MW: 27234.3 Da PI: 9.4661

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020686768.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.4	1.3e-53	5	130	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+++yL++kv+g ++ ++i++vd++k+ePwdLp k++ +ek yfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ XP_020686768.2 5 LPPGFRFHPSDEELLTYYLTRKVSGFEFVS-KAISDVDLNKCEPWDLPGKASLGEKVGYFFSLKDRKYPTGMRTNRATNAGYWKTTGKDKEIFH- 97 79***********************988.88***********8888888999********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 g+lvg+kktLvfykgrapkgekt+Wvmheyrl XP_020686768.2 98 YGALVGMKKTLVFYKGRAPKGEKTNWVMHEYRL 130 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEEGLPPGFR FHPSDEELLT YYLTRKVSGF EFVSKAISDV DLNKCEPWDL PGKASLGEKV 60 GYFFSLKDRK YPTGMRTNRA TNAGYWKTTG KDKEIFHYGA LVGMKKTLVF YKGRAPKGEK 120 TNWVMHEYRL QSEFPHKPSK EEWVVCKIFK KCNNFHMKEP SSSFPSMLLE SPGNTLSNQF 180 GDIDVSSMCS GGFSPPVIKG FPVVEMRQEG KGVKCKAEKP LHKLTHLPWC GGVPDAMSSS 240 R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	3e-86	NAC family protein