PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686859.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 85aa    MW: 10193.8 Da    PI: 10.3412
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.46.5e-082268153
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
                    k+r rWt+e H+rF+ea++      +A P+ i e+++ k  t  +++SH Qk+
  XP_020686859.1 22 KQRERWTEEEHNRFLEALKLY---GRAWPR-IEEHIGTK--TAVQIRSHAQKF 68
                    79****************988...489995.99999998..8999*******9 PP
2Myb_DNA-binding53.27e-172468147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r rWT+eE+ ++++a k++G   W +I +++g ++t+ q++s+ qk+
   XP_020686859.1 24 RERWTEEEHNRFLEALKLYGRA-WPRIEEHIG-TKTAVQIRSHAQKF 68
                     78******************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MEINSSGEEL VVKTRKPYKI TKQRERWTEE EHNRFLEALK LYGRAWPRIE EHIGTKTAVQ  60
IRSHAQKFFT KVNYFFHLIS AFIIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46830.12e-40MYB_related family protein