PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020686975.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 200aa    MW: 21603.9 Da    PI: 8.0695
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020686975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer80.12.7e-251364558
     ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     Y eC++NhAa+lG++a DGCgEf ++  + + +a+  C+ACgCHRnFHR+  +
  XP_020686975.1 13 LYGECMRNHAAALGAYASDGCGEFAAD--DISLPATYFCSACGCHRNFHRKLFD 64
                    6************************98..5578*****************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSKRSYRELP WKLYGECMRN HAAALGAYAS DGCGEFAADD ISLPATYFCS ACGCHRNFHR  60
KLFDTSGYSS HFPPETAAVA VSDNRSDGRR RSRTKFTAEQ KAQMKSFAER LGWRMPKRPE  120
AEEELEVERF CNEIGVSRHV FRVWMHNHKG GGGGCGAGGV AAPANSSSAT NNSDGVVVGG  180
GGGAGESEER DGDRKSTTAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60480.14e-29ZF-HD family protein