PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687244.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 205aa    MW: 22548.6 Da    PI: 7.6764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.9e-154797155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr  ++ g+Wv+e+r+p++   ++r++lg++  +e+Aa+a++ a+++l+g
  XP_020687244.1 47 PVYRGVR-ERNGGKWVCEVREPRT---KTRIWLGTYSAPEMAARAHDVAALALRG 97
                    68****9.7779*********854...4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDSSDSFSTS ASSSSDHAPS PSSFSSSPSP PPKRKSGRKK FRVTRHPVYR GVRERNGGKW  60
VCEVREPRTK TRIWLGTYSA PEMAARAHDV AALALRGKSA FLNFPDSAWA LPVPRSTRPD  120
DIRLAAVKAA EMYKTRPAAS TVLSSLAPPS VAVLDEEDVF NIPELMMEMA AGMLITPPGM  180
VGGFDWDAAE LVEEEMPLWQ HDFWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.23e-41ERF family protein