PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687414.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 243aa    MW: 27775.5 Da    PI: 9.434
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66.3e-17172206135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+C +  Tp+WR gp g+ktLCnaCG+++++ +l
  XP_020687414.1 172 CSHCLSHRTPQWRAGPLGPKTLCNACGVRFKSGRL 206
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVVYRNTVVC GDIPAEFQPE KVPSSSNTMW EDFFPGQNKE EDEENDSLQW LSIYVEDCLS  60
GNTSFTSPPS PTHSNTIKIS QNPKQTQKLS SSFENFSLSV PAKARTKRRK TKDDFNFLNY  120
SKESPLLHQK HWLAESELLI IPKMEKLDKL QEHAEKGIGN GRELQQLQPR RCSHCLSHRT  180
PQWRAGPLGP KTLCNACGVR FKSGRLHPEY RPAKSPTFVS YMHSNSHKKV MEMRMVGLSS  240
HSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.15e-35GATA family protein