PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020687688.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

SRS

Protein Properties

Length: 255aa MW: 27473.5 Da PI: 7.3828

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020687688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	101.9	1.1e-31	71	132	4	65
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaa 65 ++sCqdCGnqa+kdC+h+RCRtCCk+rgf+C+thvkstWvpaakrr+r q+ aa +s++ a XP_020687688.1 71 EGISCQDCGNQARKDCSHMRCRTCCKNRGFHCQTHVKSTWVPAAKRRDRNQRFAAGESSRRA 132 5789*********************************************9999887766554 PP
2	DUF702	70.4	5.6e-22	133	188	99	153
DUF702 99 eletss.lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 +++ + +P+ev +avfrcvrv+ vd++ee+laYqtavsi G vfkG+LydqG++ XP_020687688.1 133 VMDQDEiFPAEVCLPAVFRCVRVKQVDEAEEQLAYQTAVSIRGRVFKGLLYDQGPQ 188 3333336***********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAGFSLGGGG DDGGFGHGNQ RGGEEESHFL YNRTGRGGQN VWKQQEQLFS VPTGSLLAFG 60 GGDEPASDNR EGISCQDCGN QARKDCSHMR CRTCCKNRGF HCQTHVKSTW VPAAKRRDRN 120 QRFAAGESSR RAVMDQDEIF PAEVCLPAVF RCVRVKQVDE AEEQLAYQTA VSIRGRVFKG 180 LLYDQGPQFS SAERQMLHSG ESSSSAAGGF GTGVIMGSTT AAAGDLVTDT SSIYPNPVGA 240 FMSGTLFFPQ QQPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-51	SRS family protein