PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687905.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 216aa    MW: 23871.3 Da    PI: 4.3985
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-183079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +gr+++eIrdp +   + r++lg+f+taeeAa a+++a+++l+g
  XP_020687905.1 30 RYLGVRRRP-WGRYASEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRG 79
                    588******.**********843...4*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDLSHLFSSH SSPSQPNPTQ NLLHQTTNQR YLGVRRRPWG RYASEIRDPA TKERHWLGTF  60
DTAEEAAVAY DRAARSLRGP RARTNFAYPD LPLGSSLTPF LSPDLPSPQP FFTMSPAPPQ  120
LLPSVTFLPS HQQLPAVVEE ESNIVVPGSH DCFSNEGALL DSGEFSGFGT VEEEISFFDE  180
GYLDSSLFGP MPEASEYSNI SVDDYQLGGS SSSYFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.17e-29ERF family protein