PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020687951.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 173aa    MW: 18460.9 Da    PI: 8.1428
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020687951.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-055577123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ Cgk+Fs+   L  H ++H
  XP_020687951.2 55 YQCSVCGKTFSSYQALGGHKSSH 77
                    9*************999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MATQAFLSFF SPLPSPSPSP NHPPPVTAEE SVALCLFNLA AGGSCIMSQP SVPLYQCSVC  60
GKTFSSYQAL GGHKSSHRRL AAPGEPGRAD RPAGPTVGES NGSGAHQCSL CMRRFQTGQA  120
LGGHKRLHYW EAAAAPSSSF ISVNVRVFDL NLPPEEEEEI QSPLLRKKIR LSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43170.16e-29C2H2 family protein