PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020688037.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 182aa    MW: 19679.2 Da    PI: 5.2518
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020688037.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-173584256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    gy+G+r++  +g+Wv+eIr+ +   k+ r++lg++ tae+Aa a++aa+++l+g+
  XP_020688037.2 35 GYRGIRRR--SGKWVSEIRERR---KSNRIWLGTYPTAEMAAVAYDAAALALRGA 84
                    8****854..6*********42...459************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MTPSTLKLYN NKHIFIHHSS INNLMADSSR PSAIGYRGIR RRSGKWVSEI RERRKSNRIW  60
LGTYPTAEMA AVAYDAAALA LRGADAVLNF PNAAASLPTP ASASADDIRA AAAAAAAQLG  120
SEMSVDVGIS GFIDEEELFD MPKLLVNMAE GMLLSPPRLT PAASYDLSEV DSHGENLWNF  180
DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-21ERF family protein