PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020688799.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 178aa    MW: 19715 Da    PI: 4.5689
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020688799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.78.8e-112473155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+GV+ +   g+W Ae++ +     +  k+++lg + t+e+Aa  ++  +++++g
  XP_020688799.1 24 SRYHGVSLHN--GKWKAEVYSW-----HhsKTIWLGLYATPEMAAITYDVGALAYNG 73
                    78*****885..******8777.....446*******************99999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MADSTPPSQV QTSASNTKPN VPPSRYHGVS LHNGKWKAEV YSWHHSKTIW LGLYATPEMA  60
AITYDVGALA YNGGNAVFNF PDALRLHPVL KTTSITHVRA AATEVATQYG LRPKAVDASE  120
VTSQEIGEYV DEDELFYMPQ VLTDMAEGLM ISPPRLGPPE HYEPLEVVQD DNLWNFDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-23ERF family protein