PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689039.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 209aa    MW: 22562.7 Da    PI: 9.116
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000214769123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_020689039.1 47 FSCNYCRRKFYSSQALGGHQNAH 69
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MLMEQDSSQF IELNLIASMA AVSTLAQSTP PPETAAEGVE TAEQRVFSCN YCRRKFYSSQ  60
ALGGHQNAHK RERQLAKRGR GGPVDDNRHF AGLPLRPLGI QTHSMVHKAY FGSPSAPAMV  120
AGMMAGRQGW FRTPVGTGVG RLLAEEYSGG MLMPFRGAGV RFDEVPPPPS AAAEEVGGVG  180
GFQYKWMGSG VLLNQGKEET HKLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.13e-24C2H2 family protein