PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689221.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 118aa    MW: 13421.4 Da    PI: 7.5864
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.00011929121
                    EEETTTTEEESSHHHHHHHHH CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                    +kC+ Cg+sF +   L  H  
  XP_020689221.1  9 FKCKTCGRSFATYQALGGHRT 29
                    89*********9998877765 PP
2zf-C2H214.40.000114971123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ Cg  Fs    L  H+r+H
  XP_020689221.1 49 HQCSVCGLNFSMGQALGGHMRRH 71
                    79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MEKRRDHEFK CKTCGRSFAT YQALGGHRTG HTRPKEREEK TTKIKERVHQ CSVCGLNFSM  60
GQALGGHMRR HKLLDLLAAP MFVPVLNFDL NVIPMDGDDD GDHYDEVDLP ELTLKLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-17C2H2 family protein