PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020689224.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 231aa MW: 26023.5 Da PI: 7.1495

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020689224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.5e-19	20	80	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++tkeq+ +Le l+ + r+p+a+++++++ kl +++ ++V++WFqN++a++++ XP_020689224.1 20 SSRWNPTKEQIAILEGLYWQgIRTPTADQIQHITGKLreygSIEGKNVFYWFQNHKARQRQ 80 58**************988************************************97 PP
2	Wus_type_Homeobox	113.8	8.6e-37	19	82	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi iLe ly +G+rtP++++iq+it +L+eyG ie+kNVfyWFQN+kaR+rqkq XP_020689224.1 19 PSSRWNPTKEQIAILEGLYWQGIRTPTADQIQHITGKLREYGSIEGKNVFYWFQNHKARQRQKQ 82 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MEEEKPPSPP SSSLPAASPS SRWNPTKEQI AILEGLYWQG IRTPTADQIQ HITGKLREYG 60 SIEGKNVFYW FQNHKARQRQ KQKQESFAYF SRLIHRHPPP PPPPPPPPAI SCSNVLCAPF 120 CLRVPQVEGV GLYKPQYPHV YLTGGAIKRP LPELQRMEMA SKKSLEPISS THQCSYETLQ 180 LFPLHPTGIM EKTGSSLTSS SMEANCNEEE GQDEEGCEIL PFFNFFGDNR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	2e-41	WOX family protein