PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689280.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 159aa    MW: 17547.4 Da    PI: 9.1017
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.001389111123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F     L  H+r+H
  XP_020689280.1  89 HECSICGLEFAVGQALGGHMRRH 111
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MVGMIKRPRL QHEEGDREMA KVLILLSHDG DDKKNSPPVP SPPAGRIFEC KSCNRQFATF  60
QALGGHRASH KKPKVAGERE ALEVKTKVHE CSICGLEFAV GQALGGHMRR HRAAAEAEKK  120
GVMWMDLNLT PMENDLVMRK MAGIGVGIGD RIPVVDCFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.12e-30C2H2 family protein