PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689371.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family B3
Protein Properties Length: 290aa    MW: 33168.1 Da    PI: 9.5814
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.74.5e-18134221196
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v++  +l lp kf+++h   + ++++++lede+g++ e  +i r+++    l++GW++F+ +++L++gD +vFkl++ s+f  +++
  XP_020689371.1 134 FVKSMLRSHVSSCFWLGLPTKFCRDHL--PLCETKMILEDEEGEEHEAIYIGRRTG----LSGGWRSFAVDHKLEDGDALVFKLIELSRF--KIH 220
                     89************************5..457889***************544444....************************987888..555 PP

                     E CS
              B3  96 v 96 
                     +
  XP_020689371.1 221 I 221
                     4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEASIHAYED IRRKRIEKNL KQLEDLGIAR ISKSLLEVAK RESKQLKIHT CFKAKKLLET  60
SELRRSSRIQ KEVPSYCDDV VDSGKRRLYY RRSCKSEPIG REYTGRIASY EEKVVALKKA  120
EMLLTEVSSN HPSFVKSMLR SHVSSCFWLG LPTKFCRDHL PLCETKMILE DEEGEEHEAI  180
YIGRRTGLSG GWRSFAVDHK LEDGDALVFK LIELSRFKIH IVKAIVGSTE AKDEKALYED  240
PCASIESIKT ADSSCESKSS LFAIQVPKNK SEDLSRNARK RKQSKPRPSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-55B3 family protein