PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689389.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 254aa    MW: 28058.3 Da    PI: 6.6421
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.81.2e-19106169359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S....SSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa....edpkvveitYegeHnhe 59 
                     Dg++WrKYGqK +++sefprsYY+Ct++   gC+++k +++++    ++p   ++ Y+ +H+++
  XP_020689389.1 106 DGHQWRKYGQKRIHSSEFPRSYYKCTHSkdqGCKATKTIQQKEdkisNNPPKYVVSYSVHHTCK 169
                     9**************************98999*******9876111146778899999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MAEHPFSQSS TVIDHLSRGY ERLTQLLALI SSSPANPSTT APAMVLVDKA MCCIAAALSE  60
LQTSSPRSVD SPTAAEDHRN GTDSKKSRCK KNVQSWTIVT SVPHFDGHQW RKYGQKRIHS  120
SEFPRSYYKC THSKDQGCKA TKTIQQKEDK ISNNPPKYVV SYSVHHTCKA IETHEIPIVM  180
DSLAITNEHS TSSSQAASPD LSSPVLPKPV ADIEQVSPIM DYTEPDHGEA NWFEGSGLLS  240
PFADSDIDWE RLMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-20WRKY family protein