PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689410.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 104aa    MW: 11906.8 Da    PI: 10.5049
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.23.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed ll+ +v+ +G g W+t++ + g++R++k+c++rw++yl
   XP_020689410.1 14 KGAWTANEDRLLITYVNTHGEGKWTTVPYKAGLKRSGKSCRLRWLNYL 61
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MGRNSCGSKE GLNKGAWTAN EDRLLITYVN THGEGKWTTV PYKAGLKRSG KSCRLRWLNY  60
LSPKIKRGNF SEEENDLIIR LHKLLGNRLA LSSLYFLVKY LFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.13e-39MYB family protein