PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020689591.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 162aa MW: 18798.3 Da PI: 10.3305

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020689591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.5e-33	83	141	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ XP_020689591.1 83 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCNVKKQVQRLSKDEGIVVTTYEGIHSHP 141 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MLKKASITMN KQEDISTKNY LLPNFTNGFP GFRDSINTTM KKVMEGGNEE EEKNGSSVGK 60 KKGEKKVKRP RFAFQTRSQV DILDDGYRWR KYGQKAVKNN KFPRSYYRCT HEGCNVKKQV 120 QRLSKDEGIV VTTYEGIHSH PTEKNSDNFE QILSQMKIYT RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-54	WRKY family protein