PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689815.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 226aa    MW: 24995.9 Da    PI: 4.9139
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-1994144356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f+t+e Aa a+++a+ +++g+
  XP_020689815.1  94 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDTPEAAAMAYDQAAFSMRGA 144
                     9*******.**********44465..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDSSVLFHSP LMSELSSDSS VDSSSTSNSF LPFNVDDSED MLLFNMMLAA AATTLGGAAN  60
TSNSNSDSDA TANLLKEEEV ESASTLRREQ MRSYRGVRRR PWGKFAAEIR DSTRNGVRVW  120
LGTFDTPEAA AMAYDQAAFS MRGAMAVLNF PVEKVRESLR GVRYVEEGCS PVVALKRRHS  180
IRRKSAALAA REKEVERRND TVVELEDLGV EYLEELLRVS DVASHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-59ERF family protein