PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689823.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 138aa    MW: 15094.9 Da    PI: 5.2835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689823.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-192071256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr+++ +g+++AeIrd s++g + r +lg+f+taeeAa+a+++a+ +++g+
  XP_020689823.1 20 RFRGVRRRP-WGKFAAEIRD-STRG-SVRLWLGTFDTAEEAARAYDRAAVAMRGH 71
                    69*******.**********.4555.7**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MEDQDHPVQY SARSGEKPVR FRGVRRRPWG KFAAEIRDST RGSVRLWLGT FDTAEEAARA  60
YDRAAVAMRG HLAILNFPGE LPSSTTAGTT ASPASSLPEM DLTGLRSVAG RGKQVIELEC  120
LDDKLLEDLL YLGEEGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-24ERF family protein