PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689860.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 94aa    MW: 10793.8 Da    PI: 9.4636
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-071460447
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     W++   +l+ +a + + ++   +W  +ar +g g++  ++++++  +
   XP_020689860.1 14 WSKSQNKLFERALAVYDKDtpdRWQNVARFVGGGKSVDDVRLHYERL 60
                     ********************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MASSTASRNS SSGWSKSQNK LFERALAVYD KDTPDRWQNV ARFVGGGKSV DDVRLHYERL  60
LEDVRRIESG HVPYPNYRST GGNEEQSHRF LNYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-29MYB_related family protein