PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020689939.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 233aa    MW: 25102.2 Da    PI: 7.5613
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020689939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-057496123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ykC+ Cgk Fs+   L  H  +H
  XP_020689939.1 74 YKCSVCGKAFSSYQALGGHKTSH 96
                    9***********99998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MAIEAPQTAP AGHTISDESR FPMEGWIKRK RSNRQSRVLD RSQSEEEYLA LCLLTLARDR  60
SYTFSQIPSP NLDYKCSVCG KAFSSYQALG GHKTSHRKPV PVHSGDNHLF AGSPAVSSLS  120
SDGDHKGHQC LICLKTFATG QALGGHKRCH YDGTIGSAAG AGSAAAASSE TGSAGTRGFD  180
LNLPPVMEFG FEIGRRYWGL EEEEEEVQSP LPSKRPRLPI TAEVSPAPLI GFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-42C2H2 family protein