PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690172.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 310aa    MW: 32444.8 Da    PI: 9.0211
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.51.6e-3939100263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     ke++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_020690172.1  39 KEQSLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 100
                     67899*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDTVQWPQQG IGVVKGSVVE TNQRQAQIQV ERSRVRPHKE QSLNCPRCNS TNTKFCYYNN  60
YSLTQPRYFC KTCRRYWTEG GSLRNVPVGG GSRKNKRSSS SSSSCSSSTS SNSTPTPTLT  120
STTPTTTLPS SSSTNLHPSE HMINHSLGSS KFYQGGSVHD LNLSFPNQSL GGHELGGSMS  180
ALELLRNGIS ARGLGPFVPA AMPPGPTSLF GAGFGFQELM RPASNSMKLH PLDGVGGSSG  240
YGGSMQEEGD GRLLFPFEDL KQVSMSNGSH EGVVQGHGDP TLFWNGIMGS GGGGGGGNGG  300
GGGAGGGASW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.22e-42Dof family protein