PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690181.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 95aa    MW: 10922.2 Da    PI: 8.8593
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.7e-10953345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT+   +l+ +a + + ++   +W  +ar +g g+t++++k+++ 
   XP_020690181.1  9 TWTQKQNKLFERALAVYDKDtpdRWQNVARAVG-GKTAEEVKLHYE 53
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MASRNSSSTW TQKQNKLFER ALAVYDKDTP DRWQNVARAV GGKTAEEVKL HYELLVEDLK  60
YIESGHFPAP DYKSSGARNT VTEEESRSLR YLKLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-37MYB_related family protein