PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690401.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family BES1
Protein Properties Length: 305aa    MW: 33476.6 Da    PI: 9.5938
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.15e-6441532145
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspessl 94 
                     g+gr+ptwkErEnnkrRERrRRaiaaki++GLR+ Gnyklpk++DnneVlkALc+eAGwvve+DGttyrkgskpl    +++ag+  ++ ++ s+
  XP_020690401.1   4 GGGRMPTWKERENNKRRERRRRAIAAKIFSGLRNLGNYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGSKPLarPPEATAGAPCTNYISPSS 98 
                     89*************************************************************************86444455555554433333 PP

          DUF822  95 q.sslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlsl 145
                       +s+ ssa++spv+sy+asp+sssfpsps+l++  + +    + +lp++++ls+
  XP_020690401.1  99 AfTSPPSSAFTSPVPSYHASPTSSSFPSPSRLENSDNPNRintSYILPFIRNLSS 153
                     347****************************999888766777888888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MTSGGGRMPT WKERENNKRR ERRRRAIAAK IFSGLRNLGN YKLPKHCDNN EVLKALCAEA  60
GWVVEEDGTT YRKGSKPLAR PPEATAGAPC TNYISPSSAF TSPPSSAFTS PVPSYHASPT  120
SSSFPSPSRL ENSDNPNRIN TSYILPFIRN LSSLPPLRIS NSAPVTPPLS SPSSRPLKLR  180
KPDWSYTAYH GHPLFLASAP ASPTRDRHHH HPATIPECDE SDSSTIDSNR WASLQNTAPA  240
SPTFNLVNRA RLMPESAVVA GGILERSLSA IEFEFESMRV KPWEGERIHE VGVEDDLVLT  300
LGLGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.39e-65BES1 family protein