PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690454.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 220aa    MW: 24540.3 Da    PI: 10.2388
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA596e-1992125134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C ttkTplWR+gp g+k+LCnaCG+++rk +
  XP_020690454.1  92 CSDCSTTKTPLWRSGPLGPKSLCNACGIKQRKAR 125
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MERQLEIKES SDDQYSSSCF YEPGEGDQHE SSVKWMSSKM RIMRKLMCSD QNNTVRKVER  60
RRQKIQDDQK KKGNKDQSSC GSSNNGGISR VCSDCSTTKT PLWRSGPLGP KSLCNACGIK  120
QRKARKAMAT ALTAVSGKLQ PVVTIKPRMN KALKVDCSVP FKKRCRFFTS AETSQRTLSF  180
EDIVISLNKS LLALNRVFPQ DEKDAAILLM ALSSGIVCSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-28GATA family protein