PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690502.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 184aa    MW: 19802.2 Da    PI: 9.6439
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690502.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof105.23.6e-331165458
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58
                      ++cprC+stntkfCyynnys sqPryfC+aCrryWt+GGalrn+P G+++ ++
  XP_020690502.2 11 PPRNCPRCESTNTKFCYYNNYSSSQPRYFCRACRRYWTQGGALRNLPHGSSATRR 65
                    5689*********************************************875433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MASESKSTSE PPRNCPRCES TNTKFCYYNN YSSSQPRYFC RACRRYWTQG GALRNLPHGS  60
SATRRVAKQS KRPSPTSYYS VAVSTTSVTP LYHQMNTGTV EPPRCFSGGR LPRQLSMGSQ  120
TIDPSMVVGV RIPPAQPEMA GAVSTVAGEE GDRILGNLFG GFEDGSGGEG AVKKMPSASS  180
GPFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21050.11e-25Dof family protein