PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020690520.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 223aa MW: 24432.8 Da PI: 8.9242

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020690520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.5	2.5e-37	30	87	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +lkcprCdstntkfCyynnysl+qPr+fC++C+ryWt+GG+lr+vP+Ggg+rk+k++ XP_020690520.1 30 PHLKCPRCDSTNTKFCYYNNYSLAQPRHFCRTCKRYWTRGGTLRDVPIGGGCRKHKRH 87 5789***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MAANIYPNVH STATAAIAGG TPALQNSATP HLKCPRCDST NTKFCYYNNY SLAQPRHFCR 60 TCKRYWTRGG TLRDVPIGGG CRKHKRHNKP KSAIVAALPN SPTLRQLANP LRPPAADLSS 120 LILRMPPATL SNRFFPMFEE AIQSGIESHH INTLQQSAEA VKSYQAPLLC YDDLPTAICE 180 GLSLIKENPT EGIYSFNGYS SAAAESAYLY AWPESCSSVV RLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	5e-33	Dof family protein