PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690700.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family B3
Protein Properties Length: 204aa    MW: 21676.1 Da    PI: 8.4825
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690700.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3382.9e-121341854398
                     S-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  43 grsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     g++W vk     +++  v+++GWk+Fv++n+L  gD +vF+l++++e +++v++++
  XP_020690700.1 134 GKEWFVKW----YPSIKVIRDGWKQFVSDNNLMIGDGCVFELMDNKELKFKVQILS 185
                     78899998....555568*************************99*******9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MHRRSCAGKP APPAAPQPAP VMNPPQAAVN HSPPPAPVQG DGSMLGGIIS TTAQGMAFGT  60
GSAEVAPQAV DAVLGPRTIQ LETLASQVPG AASVPMTRAS IVPFEGKPYF TDIPKKIHQF  120
LPPSLAWIAL CYGGKEWFVK WYPSIKVIRD GWKQFVSDNN LMIGDGCVFE LMDNKELKFK  180
VQILSGELPA TKVGSSINSS IIID