PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690812.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 180aa    MW: 19967.2 Da    PI: 9.4225
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-102371555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     + +E++RR +++s +++L +llP +   ++  l   e L + v YIk+Lq
  XP_020690812.1 23 RKTIEKKRRMHMKSLYARLNSLLPCS--KKGVSLPLPELLDESVSYIKDLQ 71
                    678**********************6..38888*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKSAYTFFQL NMVANAGSAR PDRKTIEKKR RMHMKSLYAR LNSLLPCSKK GVSLPLPELL  60
DESVSYIKDL QKKLEQMKET KSQLAGGMGS EISTITPHLD LREVDGRVGV AIITDARDLS  120
VFCKVVEVIE EEGGEILSAN VTIVGNKAFY IIHSLVEEGN SGSETIRVSE KLRNRVKSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-20bHLH family protein