PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020690931.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 140aa    MW: 15307.4 Da    PI: 10.1192
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020690931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA65.27.1e-213468135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+ CgttkTplWR gp+g+k+LCnaCG++yrkk++
  XP_020690931.1 34 CTDCGTTKTPLWRGGPSGPKSLCNACGIRYRKKRR 68
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MDLSGEKATG STDPSADTSN RDCEVSIFDG SKSCTDCGTT KTPLWRGGPS GPKSLCNACG  60
IRYRKKRRAA IGSTKERSED TRNNSSSKKM SSLKMRMMGF GREIIWKPGS LVRNQKNRRL  120
GEEEEAAILL MAISSGFIYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-27GATA family protein