PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020690947.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

HSF

Protein Properties

Length: 132aa MW: 15147.5 Da PI: 9.5436

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020690947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.8	1.3e-36	24	115	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d++++++isw+++g++fvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgFkk+ ++ weF+++sFk+gkk ll++ XP_020690947.1 24 FLAKTYQLVDDPTIDDVISWNDDGSTFVVWKPVEFARDLLPKYFKHNNFSSFVRQLNTYGFKKIVPDR---------WEFSNDSFKRGKKWLLCE 109 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_020690947.1 110 INRRKM 115 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MVALPLAIEP PATVEAQRSM PTPFLAKTYQ LVDDPTIDDV ISWNDDGSTF VVWKPVEFAR 60 DLLPKYFKHN NFSSFVRQLN TYGFKKIVPD RWEFSNDSFK RGKKWLLCEI NRRKMATPVV 120 SAVALEAAPV NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	3e-59	HSF family protein