PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020691134.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 222aa MW: 25025.5 Da PI: 8.706

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020691134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.7	8.1e-35	47	190	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........t 78 lp+G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp ++++ + +fF++ +k+y+tg+rk+r+ XP_020691134.1 47 LPAGVKFDPTDQELI-EHLEAKVSTHGlgshplIDEFILtIDGEdGICYTHPEKLP-GLAKDGVSKHFFHRPSKAYTTGTRKRRKiqttevnneQ 139 799**********.99**9997776664444444777646******.444556788**************76776666544 PP NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ kge +g+kk+Lv+y g+ +k+ekt+Wvmh+y+l XP_020691134.1 140 GETRWHKTGKTKPVIV-KGEPKGCKKILVLYanFGKCRKPEKTNWVMHQYHL 190 4788********.999*******6547889999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MNKSPIASAT RASDLINAKL AEHQIIGSNL CPTCNYKIDQ KHDWIGLPAG VKFDPTDQEL 60 IEHLEAKVST HGLGSHPLID EFILTIDGED GICYTHPEKL PGLAKDGVSK HFFHRPSKAY 120 TTGTRKRRKI QTTEVNNEQG ETRWHKTGKT KPVIVKGEPK GCKKILVLYA NFGKCRKPEK 180 TNWVMHQYHL GEMEDEKEGE LVVSKIFYQT QQRQFSASET GS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	151	RKRRKIQTTEVNNEQGETRWHKTGKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-116	NAC family protein