PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691252.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 335aa    MW: 36509.2 Da    PI: 10.0289
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.98.8e-066789123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C++ F r  nL+ H r H
  XP_020691252.1 67 FVCEICNRGFQREQNLQLHRRGH 89
                    89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MTWEEARLRR RNQSTAFSSS AMSGDPNHNL NPQPPPPKKK RNLPGNPDPD AEVIALSPAT  60
LMAPNRFVCE ICNRGFQREQ NLQLHRRGHN LPWKLRQHPL GGPPARKRVY VCPEPSCVNH  120
DPARALGDLT GIKKHFSRKH GEKKWKCERC GKRYAVQSDH KAHTKTCGSR EYRCDCGTLF  180
SRKDSFVTHR AFCDALTQET AAVVGGGGGT ECLSYASDET PKEEVSLRRH NRSEMAPATA  240
AAYMSATALL QKAAEMGATA SGGASSVFFT GLLRSTKGSW SGELGKGKGK TRDFLGLGGE  300
GGGRRSMEEM ARFTSLGSGM EFMGASSSYN AAGYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14580.16e-89C2H2 family protein