PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691744.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 297aa    MW: 31910.2 Da    PI: 4.8138
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15e-18200234135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  XP_020691744.1 200 CTHCSSEKTPQWRTGPLGPKTLCNACGVRFKSGRL 234
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MMETGWEIDF GMGKGMEMTA SPATFAGASP AYMYSMPNAE SLRVDELLDF TNHDLFPSSS  60
SSSSSVPTDE AALHLPAGQE FSSSASVAAT VGFDASLPDD ICIPSEEAAE LEWLSKFMED  120
SFSDTPYHYS LPDMTMSENS NYPSSEISTH ALASGINRSP EISTSSSSSS SSSSSDFPKA  180
KTNVINKKKQ GNNESGARRC THCSSEKTPQ WRTGPLGPKT LCNACGVRFK SGRLVPEYRP  240
AASPTFVLTQ HSNSHRKVME LRRQKEFLIL RGSGGGGGDG GSSGFSTEMS FQDYEVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-56GATA family protein