PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691993.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 193aa    MW: 21736.5 Da    PI: 6.5472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.2e-2055105255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp  +g   r++lg+f+ta eAa+a+++a+ k++g
  XP_020691993.1  55 RYRGVRQRP-WGKFAAEIRDPERRG--SRVWLGTFDTALEAARAYDRAAFKMRG 105
                     7********.**********84444..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MFRFSDAPTS IIQYSDSESH LQLTIPQAAV PTVEWIDGSG GDKPPPAVEL VDCRRYRGVR  60
QRPWGKFAAE IRDPERRGSR VWLGTFDTAL EAARAYDRAA FKMRGSKAIL NFPNEVANSG  120
DWIRRSTAAT GKRVREEAEM EVEGRVKREK SESFEENIPL APSNWESTDV NDCFNLPPLS  180
PHPAMGFPRL MVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.15e-37ERF family protein