PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020691994.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 259aa    MW: 28586.5 Da    PI: 9.3341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020691994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-19117169156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr ++ +g+++AeIrdp+   ++ r++lg+f+ta eAa+a+++a+ +++g+
  XP_020691994.1 117 TQYRGVRKRR-WGKFAAEIRDPKR--RKSRVWLGTFDTALEAARAYDRAAFQMRGN 169
                     58*****887.**********944..35*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MAFAYLSALD RINKHLFSDP PASTLDEILA ALPTPPSLPA PHLADLDVSD YLDHNETLIL  60
PPASSNSHGG VRCPDPTSSI IRLDADSPST LTNPNAAADQ LSPPPAAAVI DSRQYRTQYR  120
GVRKRRWGKF AAEIRDPKRR KSRVWLGTFD TALEAARAYD RAAFQMRGNK AILNFPNEVG  180
RSGKWIQSPV AATVKRKREV EKEKLEVFER NIPTLDGPST TSSWKAVWDD LDVLGDFALQ  240
PLSPLSPYAA MGFPRVMVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123141RKRRWGKFAAEIRDPKRRK
2124142RKRRWGKFAAEIRDPKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-24ERF family protein