PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692155.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 247aa    MW: 26872.1 Da    PI: 7.0706
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692155.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.3e-0590112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C k+F+++  L  H+ +H
  XP_020692155.2  90 FECKTCQKVFTSPQALGGHQASH 112
                     89******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
TPTLPLVLTE EEHVANFLVW LSTARANPVL RNIDAAECSS SVLHITGAEE CSTSERSEAD  60
YVVLLPPSPH PENPEPHIST QTPPNAHQIF ECKTCQKVFT SPQALGGHQA SHKKVRGCFG  120
TRLEIKSPKM MKYTSTKDES NNRIPQNNQT EFSHQNNQAG ASSESMALAI APFEGTSSQL  180
SLPKKNPKVH ECSVCKRQFP SGQALGGHMR CHRRASSSRG VTVESASVVA TELQLEECVG  240
TVNTEQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.14e-20C2H2 family protein