PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692824.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 355aa    MW: 39624 Da    PI: 6.2873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.8e-052432801254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_020692824.1 243 RKEKLGDRITALQQLVSPF-----GKTDTASVLYEAIEYIKFL 280
                     677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MADEFHGLSG NWWSSMRSRI ADERSDSCFR WTESPASTKM AERNTGCAFD NSPASCVTLQ  60
ESHIVQPSDH MAGMPAMDPS LQLSISGLLS SSADHWAQSY IAENSEPYSH LKDISHGFLN  120
IDPSSSESAM NNNPIFSPSG FSLHDNLLGF EARPHQQESS GELPSIQQRS FLSKNANFNN  180
GSSDFSTLIR PLQFVETGLE EKSDFNKSAA KFNSEETVSS SNPSRSKKPR IQTPSPLPTF  240
KVRKEKLGDR ITALQQLVSP FGKTDTASVL YEAIEYIKFL HEQVRTLSSP YLRNCSQINH  300
QQNSERPKDG ESRRQQLRSR GLCLVPISST FEVACSTEIP HTNFWAPAFD MINYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.11e-41bHLH family protein