PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692949.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family EIL
Protein Properties Length: 652aa    MW: 72586 Da    PI: 5.0957
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3487.47.9e-149864661353
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmw+d+ +lkrlke+++++   ke   +++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW
  XP_020692949.1  86 EELERRMWRDRLRLKRLKEQQQNKN--KEL-GDSTKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRGWW 177
                     8*********************964..777.999************************************************************* PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fdrngpaai+kyqa+n i + +s++++ r +++ sl+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWPtG+e+ww++lg+ +dq
  XP_020692949.1 178 KEKVRFDRNGPAAIAKYQADNGIRGLNSEQNS-RPVSPYSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGISPPWWPTGNEEWWPQLGITNDQ 271
                     ***********************999999877.************************************************************** PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX.XXXX.XXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss.slrk.qspkvtlsceq 280
                      +ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+v++qee ++++++++   ++ s ++ + +  + s+++
  XP_020692949.1 272 LPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIDKIRRLVRQSKCLQDKMTAKESATWLAVVKQEEILFRELHPDaclPPsSGNNcNGTISFSSSSS 366
                     *************************************************************************8873333333344444556677 PP

                     XXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXX CS
            EIN3 281 kedvegkkeskikhvqavktta............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkn 347
                     ++dveg ++ k +++ + +                                 +++rkr   +se++++s+++++   ++s+f +s++e+++ d+ 
  XP_020692949.1 367 EYDVEGVDDGKSEEAGNTNPVLdvnnvfntstssgndlymgphhavkeegYREFIRKRS-ANSEPEIMSNQGIIIRNEKSKFARSDYEIGVMDRG 460
                     99***7777775555555444388899**********************7778888887.9********************************** PP

                     XXXXXX CS
            EIN3 348 sisqne 353
                      +s+n+
  XP_020692949.1 461 VRSNNQ 466
                     999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 652 aa     Download sequence    
MGGIAIEAAM TFSGGLDFGQ FMSIGHEKSS GYLSILQKPP SDLSHLQHTA CGDSSVIDGD  60
LVDPPPENFP ESLPDDDESD DDLDVEELER RMWRDRLRLK RLKEQQQNKN KELGDSTKQR  120
QSQEQARRKK MSRAQDGILK YMLKMMEVCK AQGFVYGIIP EKGKPVSGAS DNLRGWWKEK  180
VRFDRNGPAA IAKYQADNGI RGLNSEQNSR PVSPYSLQEL QDTTLGSLLS ALMQHCDPPQ  240
RRFPLEKGIS PPWWPTGNEE WWPQLGITND QLPPPYKKPH DLKKAWKVGV LTAVIKHMSP  300
DIDKIRRLVR QSKCLQDKMT AKESATWLAV VKQEEILFRE LHPDACLPPS SGNNCNGTIS  360
FSSSSSEYDV EGVDDGKSEE AGNTNPVLDV NNVFNTSTSS GNDLYMGPHH AVKEEGYREF  420
IRKRSANSEP EIMSNQGIII RNEKSKFARS DYEIGVMDRG VRSNNQQYLS GYPTSLPSFC  480
ATGFQVNESK PQTICASLAQ SKLNQSVLQS TVINTSSPFD LSGIGLPDDG QKSIIELMNQ  540
YDGNINSEIG LANEEPNPGS IHAPAQAGSN FYGSMNGVCG DLFEGANNSQ FFPFHDDLMQ  600
MNQAYHPAQS NNINNELKFE SPFTMQSMDF ADSLPRGMVQ SLQSQNGSGW FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-158EIL family protein