PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020692973.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 260aa    MW: 27974.2 Da    PI: 8.1919
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020692973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.91.1e-382077562
          zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                     l+cprCdstntkfCyynnysl+qPr+fCk+C+ryWt+GG+lrnvPvGgg+rknk+++
  XP_020692973.1 20 PLNCPRCDSTNTKFCYYNNYSLAQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRTK 77
                    679****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MVAKLDSGTA AAQQNAGSPP LNCPRCDSTN TKFCYYNNYS LAQPRHFCKS CKRYWTRGGT  60
LRNVPVGGGC RKNKRTKKSH RSAPSITAAA PSLPPPPVIH SPATDLSSLL YGFPQMMNSS  120
TVFFPKFELD AQFAGYEENF QSCLSAANIV DLQKSAAAPA DFLGDYSLLN SHIPSSSSPM  180
AAEAYQPLLS YDDINMGTEN NTSNRSINNW QDTKGNPLEA TNSFAASGGS GAVAQTPYLY  240
WNQAMCSGWP ESSSSVAPLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-34Dof family protein