PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693121.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 182aa    MW: 19600.4 Da    PI: 7.5076
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00136284123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_020693121.1 62 FECKTCSRKFTTFQALGGHRASH 84
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MTKRFRLISE EEEDMASSIC TDSFNIANVL MLLSRGHGAA AGDAVSPVAA VAGRETQEGK  60
VFECKTCSRK FTTFQALGGH RASHKKPRLG GSAAAPEKPK VHECSICGLE FAIGQALGGH  120
MRRHRPASEN VVGQLGGPSM EKSSTQIDLN LPPLERGEEE EVRQLPKLLG FTLTPAMVDC  180
FH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-31C2H2 family protein