PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020693169.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 349aa    MW: 38329.7 Da    PI: 6.7782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020693169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432162541255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_020693169.1 216 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 254
                     6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MNRSGVYQGS LLQQMVGGST SWWNMSNMRP TNGEISHILH PHPLSSSSAL QQHLQPSNSL  60
SLNSLYESQE LPQSWSQLLL GGLVGEEERY SLDTPFKKAL NWEEQLMHQT QGAYTVDVKQ  120
ENSESLYSHG STSEEIQAAT GSKASWSQIL PVSSPRSCVT SSLSCNMLDF SNNKTERRNL  180
PPDHSSECNS IETGAALKKA RIQGSSQSQS STFKVRKEKL GDRITALHQL VSPFGKTDTA  240
SVLLEAIGYI RFLQSQIEAL SSPYLNTVSA KTRLPAQGER SCIFPEDPGQ LLNDNCMKKR  300
GPSDQNGNDE TKKDLRSRGL CLVPVSCTLH VGSDDGADYW SPSLGGCFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-83bHLH family protein